Name Graduated PI Current affiliation
Daniel Asarnow 2021 Yifan Cheng Postdoc, Cheng Lab, UCSF
Derek Britain 2021 Orion Weiner Postdoc, Weiner Lab, UCSF
Rachel Brunetti 2021 Orion Weiner Postdoc, Weiner Lab, UCSF
Weiyue Ji 2021 Lani Wu, Steven Altschuler Postdoc, Altschuler & Wu Lab, UCSF
Nadja Kern 2021 Ron Vale Scientist, Inhibrx
David Bauer 2020 Wallace Marshall Postdoc, Marshall Lab, UCSF
Alain Bonny 2020 Hana El-Samad Postdoc, Fuchs Lab, Rockefeller University
Ilan Chemmama 2020 Andrej Sali Scientist, Brightseed
Marco Mravic 2020 Bill DeGrado Faculty Fellow, The Scripps Research Institute, La Jolla
Stefan Niekamp 2020 Ron Vale Postdoc, Kingston Lab, Massachusetts General Hospital/Harvard Medical School
Samuel Thompson 2020 Tanja Kortemme Postdoc, Fordyce/Baker Labs, Stanford/University of Washington
Ruilin Tian 2020 Martin Kampmann Assistant Professor, SUStech
Alexander Wolff 2020 James Fraser Medical Writer, Nucleus Global
Benjamin Barad 2019 James Fraser Postdoc, Grotjahn Lab, Scripps
Miguel Betegon Ramiro 2019 David Agard Postdoc, Brodsky Lab, University of Pittsburgh
Justin Biel 2019 James Fraser Specialist, UCSF, Fraser Lab
Leo Gendelev 2019 Michael Keiser AI Scientist, Genetech
Evan Green 2019 Yifan Cheng Postdoc, Genentech, Payandeh Lab
John Hawkins 2019 Carol Gross, Stanley Qi Senior Computational Biologist, Freenome
Lillian Kenner 2019 Adam Frost Postdoc, Genentech
Amanda Loshbaugh 2019 Tanja Kortemme Scientist I, Lyell Immunopharma
Eugene Palovcak 2019 Yifan Cheng AI research scientist, Invitae
Neville Bethel 2018 Michael Grabe Postdoc, University of Washington, Baker Lab
Yemima Citron 2018 David Agard, Bo Huang Postdoc, Zoncu Lab, UC Berkeley
Kale Kundert 2018 Tanja Kortemme Postdoc, Church Lab, Harvard
Weihan Li 2018 Peter Walter Postdoc, Singer Lab, Albert Einstein College of Medicine
Zairan Liu 2018 Matthew Thomson, Orion Weiner Associate Consultant, IQVIA
Amy Chang 2017 Wallace Marshall Postdoc, UCSF
Yuan Gao 2017 Yifan Cheng, David Julius Postdoc, Harvard
Diego Garrido Ruiz 2017 Matthew Jacobson Postdoc, UCSF
John Haliburton 2017 Adam Abate Platform Leader- Single Cell Genomics, Chan Zuckerberg BioHub
Theodore Ho 2017 Emmanuelle Passegue Postdoc, Deisseroth Lab, Stanford
Max Horlbeck 2017 Jonathan Weissman Pediatrics Residency, Boston Children's Hopsital
David Mavor 2017 James Fraser Postdoc, Bolon Lab, University of Massachusetts
David Paquette 2017 John Gross Senior Science Writer & Project Coordinator, Dept. of Medicine, University of Massachusetts Medical School
Veronica Pessino 2017 Bo Huang Managing Scientist, Neurophotometrics
Sara Calhoun 2016 Andrej Sali Postdoc, Joint Genome Institute
Si-Han Chen 2016 Nevan Krogan Postdoc, Wertz Lab, Genentech
Charles Greenberg 2016 Andrej Sali Health Sensing Data Scientist, Apple
Christina Homer 2016 Hiten Madhani Resident Doctor at Department of Internal Medicine, UCSF
Jonathan Gable 2015 Charles Craik Investigator III, Lead Discovery NITD, Novartis
Erik Jonsson 2015 Ron Vale Postdoc, UC Berkeley, Martin Lab
Anthony Shiver 2015 Carol Gross Postdoc, Huang Lab, Stanford
Andrew VanBenschoten 2015 James Fraser Head of Data Science, Ovative Group
Brittany Belin 2014 Dyche Mullins Principal Investigator, Adjunct Assistant Professor, Carnegie Institution for Science, Johns Hopkins University
David Booth 2014 Yifan Cheng, Alan Frankel Assistant Professor, UCSF
David Burkhardt 2014 Carol Gross Senior Bioinformatics Scientist, GRAIL
Jennifer Hsiao 2014 Dyche Mullins Scientist, Denali Therapuetics
Natalia Khuri 2014 Andrej Sali Assistant Professor, Dept. of Computer Science, Wake Forest University
Elaine Kirschke 2014 David Agard Senior Biological Scientist, Apeel Sciences
James Kraemer 2014 David Agard Scientist, Invaio Sciences
Zhiyuan Li 2014 Chao Tang, Hao Li Professor, Center for Quantitative Biology, Peking University
Dan Lu 2014 David Morgan, Chao Tang Bioinformatician, Northwestern University
Brandon Razooky 2014 Leor Weinberger Postdoc, Rockefeller
Edwin Rodriguez 2014 Jonathan Weissman Resident, Columbia University in the City of New York
Melanie Smith 2014 Jonathan Weissman Postdoctoral Researcher, Sloan Kettering Institute for Cancer Research
Ian Vaughn 2014 Michael McManus Teaching
Charles Biddle-Snead 2013 Hana El-Samad Associate Computational Scientist, Nodality
Hannes Braberg 2013 Nevan Krogan Associate Specialist, UCSF, Krogan Lab
Maya Chandru (Overland) 2013 Steven Finkbeiner Resident, UCSF
Rebeca Choy 2013 David Agard Senior Scientist, Maze Therapeutics
Jaline Gerardin 2013 Wendell Lim Assistant Professor, Dept of Preventive Medicine, Northwestern University
Joe Kliegman 2013 Kevan Shokat Senior Strategist, Cerner
Kris Kuchenbecker 2013 Robert Fletterick Silver Creek Pharmaceuticals
Laura Lavery 2013 David Agard Postdoc, Baylor College of Medicine, Zoghbi Lab
Liz Montabana 2013 David Agard Cryo-Electron Microspopy Scientist, Stanford University
Ryan Ritterson 2013 Tanja Kortemme Scientist, Gryphon Scientific
Gabriel Rocklin 2013 Brian Shoichet, Ken Dill Assistant Professor of Pharmacology, Northwestern University
Geoffrey Rollins 2013 Ken Dill Data Scientist, Atlassian
David Stanley 2013 John Gross Process Development Scientist, Codexis, Inc.
Monica Tremont 2013 Matthew Jacobson Data Scientist, Intuit
Reid Williams 2013 Wendell Lim Bioscience Designer, IDEO
Zachary Apte 2012 Wallace Marshall Co-founder and CTO, uBiome
Sheel Dandekar 2012 Orion Weiner Data Analyst, Intuit
Sai Duriseti 2012 Charles Craik, Tejal Desai Resident, Radiation Oncology, Washington University, St. Louis
Ian Harwood 2012 Susan Miller, Robert Stroud Product Manager, Bio-Rad Explorer
Ethan Mirsky 2012 Christopher Voigt VP Operations, Bolt Threads
Jack Peterson 2012 Ken Dill Scientist, INDY Labs
Stephen Floor 2011 John Gross Assistant Professor, UCSF
Chris McClendon 2011 Matthew Jacobson, James Wells Senior Scientist, Pfizer
Richard Oberdorf 2011 Tanja Kortemme Consultant, Ab Initio
Hesper Rego 2011 Mats Gustafsson Assistant Professor, Yale
Caleb Bashor 2010 Wendell Lim Postdoc, Boston University, Collins Lab
Elizabeth Clarke 2010 Christopher Voigt Founder, Industrial Microbes
Molly Darragh 2010 Charles Craik Postdoc, NSF/ASEE Fellow, Ocean NanoTech
Debajyoti Datta 2010 James Wells Medicine Resident, Thomas Jefferson University Hospital
Matt Eames 2010 Tanja Kortemme Consultant, Cognition
Pinar Erciyas Bailey 2010 David Agard Attorney, Fenwick & West LLP, Intellectual Property Group
Clement Chu 2009 Jonathan Weissman Scientist, Counsyl
Christian Cunningham 2009 David Agard Senior Scientist, Genentech
Morris Feldman 2009 Kevan Shokat Principal Data Engineer, AppsFlyer
Elisabeth Humphris 2009 Tanja Kortemme Senior Scientist, Valera/Moderna
Quincey Justman 2009 Kevan Shokat Scientific Editor, Cell Systems
Anselm Levskaya 2009 Christopher Voigt Postdoc, Stanford
Arjun Narayanan 2009 Matthew Jacobson Senior Research Scientist, Vertex Pharmaceuticals
Peretz Partensky 2009 Geeta Narlikar CEO, ImmuneBridge
Sam Pfaff 2009 Robert Fletterick Associate Director, Silver Creek Pharmaceuticals
Neema Salimi 2009 David Agard Upper School Teacher, Savannah Country Day School
Eric Slivka 2009 Robert Fletterick Chief Editor, MacRumors.com
Justin Bradford 2008 Ken Dill Data Scientist, Cursive Labs
Raphael Buencamino 2008 Ron Vale Pediatric Resident, University of Hawaii
David Eramian 2008 Andrej Sali Intellectual Property, Stripe
Chris Farady 2008 Charles Craik Scientist and Group Leader, Novartis, Basel
Gregory Friedland 2008 Tanja Kortemme Head of Software Engineering, Atomwise
Eli Groban 2008 Matthew Jacobson, Christopher Voigt Senior Manager, Bio/Nano Research, Autodesk
Jerome Nilmeier 2008 Matthew Jacobson Data Scientist, IBM
Alexandra Schnoes 2008 Patricia Babbitt Associate Director of Career & Professional Development, iBiology
Ben Sellers 2008 Matthew Jacobson Scientific Programmer, Genentech
Jeremy Wilbur 2008 Robert Fletterick Head of Structural Biology, Relay Therapeutics
Randy Wu 2008 Hao Li Senior Director of IP and Litigation, 10X Genomics
Eli Zunder 2008 Kevan Shokat Assistant Professor, University of Virginia
Fred Davis 2007 Andrej Sali Senior Scientiest, Celsius Therapeutics
Alan Graves 2007 Brian Shoichet Director, Computational Chemistry, Nimbus Therapeutics
Brendan Murphy 2007 Ken Miller Computational Scientist, Management Consulting
Yigal Nochomovitz 2007 Hao Li Director, Biotechnology Equity Research, Citigroup
Horng Ou 2007 Volker Doetsch Research Associate, Salk Institute, San Diego
David Savage 2007 Robert Stroud Assistant Professor, UC Berkeley, Chemistry/Molecular & Cell Biology
Vince Voelz 2007 Ken Dill Assistant Professor of Chemistry, Temple University
John Chodera 2006 Ken Dill Assistant Professor, Memorial Sloan-Kettering Cancer Center
Nick Endres 2006 Ron Vale Scientist, Genentech/Leukemia and Lymphoma Society Fellow
Alex Fay 2006 Lily Jan Assistant Adjunct Professor of Neurology, UCSF
Irina Grigorova 2006 John Gross, Carol Gross Associate Professor, University of Michigan
Erik Hom 2006 John Sedat Assistant Professor, University of Mississippi
Eugene Hur 2006 Robert Fletterick Postdoc, Stanford, 2007
Felix Lam 2006 Erin O'Shea Postdoc, MIT
Byoung-Chul Lee 2006 Ken Dill CEO, Kanaph Therapeutics
Michelle Lent 2006 Lily Jan Hydrologist & Water Resources Planner, PG&E
Marc Levin 2006 Alan Verkman Neuro-opthalmologist, Palo Alto Medical Foundation
Keiko Petrosky 2006 Wendell Lim Global Oncolocoly Value & Access Lead, Sanofi Genzyme
Michael Reese 2006 Frances Brodsky, Volker Doetsch Assistant Professor, University of Texas, Southwestern Medical Center (UTSW), Dpmt of Pharmacology
Nilesh Shah 2006 Tom Scanlan Integrated Plasmonics
Krista Shipley 2006 Robert Fletterick Freelance Japanese-English Translator
Sergio Wong 2006 Matthew Jacobson Staff Scientist, Lawrence Livermore Nat'l Lab
Mark Dayel 2005 Dyche Mullins Architect, Theranos, Palo Alto, http://www.dayel.com/
Alex Kelly 2005 Volker Doetsch PI, National Cancer Institute
Helen Lai 2005 Lily Jan Assistant Professor, UT Southwestern Medical Center, Neuroscience
Mona Sridharan Kulp 2005 Jonathan Weissman Instructor, Smith College
Toral Surti 2005 Lily Jan UCSF Medical School
Hector Aldaz 2004 David Agard Principal Scientist, Cepheid
Tiba Aynechi 2004 Irwin (Tack) Kuntz Novo Ventures
Adrian Keatinge-Clay 2004 Robert Stroud Associate Professor, University of Texas
Michael Lowenstein 2004 John Sedat Ecometics Inc.
Peter Chien 2003 Jonathan Weissman Assistant Professor, Biochemistry and Molecular Biology, University of Massachusetts, Amherst
Erin Cunningham (Dueber) 2003 David Agard Senior Scientist, Genentech
Bridget Hanser 2003 John Sedat General Dynamics Advanced Information Systems
Thomas Lauritzen 2003 Ken Miller Head of Data Science, BlackThorn Therapeutics
Zach Serber 2003 Volker Doetsch Founder, Chief Scientific Officer, Zymergen
Alan Cheng 2002 Alan Frankel Research Scientist, Amgen Inc. & Adjunct Professor, Brandeis
Lilllian Chong 2002 Peter Kollman Associate Professor Chemistry, University of Pittsburgh
Marcin Joachimiak 2002 Fred Cohen Computational Scientist, Lawrence Berkeley National Labs and the Virtual Institute for Microbial Stress and Survival
Kinkead Reiling 2002 Robert Stroud CEO & Founder, Bonneville Labs
Charles Sindelar 2002 Robert Fletterick Assistant Professor, Yale
Sandra Waugh Ruggles 2002 Charles Craik President, Summit Rock Strategy Consulting
Keith Burdick 2001 Irwin (Tack) Kuntz Staff Scientist, GeneFomatics
Manish Butte 2001 Robert Fletterick Assistant Professor, Stanford
Bertrand Huber 2001 Robert Fletterick Director, National PTSD Brain Bank, VA Boston Healthcare; Assistant Professor Department of Neurology, Boston University School of Medicine
David Konerding 2001 Thomas James Senior Lead Data Engineer, Insitro
Robert Otillar 2001 C. Anthony Hunt DOE Joint Genome Institute
Eric Person 2001 Tom Scanlan Professor of Chemistry and Forensic Science, California State University, Fresno
Christopher Reyes 2001 Robert Stroud CEO & Founder, Bloom Science, Inc.
Sarah Rice 2001 Ron Vale Asst. Prof., Northwestern MCB
Jack Schonbrun 2001 Ken Dill Amyris
Noel Southall 2001 Ken Dill Informatics Scientist, NIH Chemical Genomics Center
Kurt Thorn 2001 Ron Vale Adjunct Professor. Director, Nikon Imaging Center UCSF
Wei Wang 2001 Peter Kollman Asst. Prof., UC San Diego, Chemistry
Andrew Bogan 2000 Fred Cohen, Tom Scanlan Managing Member, Bogan Associates, LLC
Rachel Brem 2000 Ken Dill Assistant Professor of Genetics and Development, UC Berkeley
Catherine Collins 2000 Christine Guthrie Associate Professor, University of Michigan
Anton Krukowski 2000 Ken Dill High School Science Teacher, San Francisco
Wa-To Lau 2000 Erin O'Shea Associate Director, External Science & Technology - Pharmacogenomics & Oncology Technologies, Bristol-Myers Squibb
Todd Pray 2000 Charles Craik Chief Strategics Partnerships Officer, Lawrence Berkeley National Lab
Bernard Walberer 2000 Alan Frankel Scientist, Ingenuity
Shane Atwell 1999 James Wells Research Advisor, Eli Lilly
Forrest Blocker 1999 Thomas James Founder and Manager, PharmStatus
Julian Chen 1999 Robert Stroud Instrument Scientist, Los Alamos National Laboratory, Lujan Neutron Scattering Center and Bioscience Division, Protein Crystallography Station
Warren Delano 1999 James Wells In Memoriam, http://www.nature.com/nsmb/journal/v16/n12/full/nsmb1209-1202.html
Paul Foster 1999 Robert Stroud Director of Protein Science, Exelixis
Jeremy Gollub 1999 Roger Cooke Associate Director, Bioinformatics, Thermo Fisher Scientific
Donna Hendrix 1999 Irwin (Tack) Kuntz Managing Director, California Institute for Quantitative Biosciences, Berkeley
Jack Nguyen 1999 Wendell Lim Founder, Catalyst Biosciences
Jed Pitera 1999 Peter Kollman Principal Research Staff Member, IBM Research - Almaden
Sarah Gillmor Hymowitz 1998 Robert Fletterick Venture Partner, Column Group
David Hackos 1998 Juan Korenbrot Scientist, Genentech
Mark Kaplan 1998 Bill Morgan Director, Translational Development, BMS
Theodore I-Fan Mau 1998 David Agard Professor of Otolaryngology-Head and Neck Surgery, University of Texas Southwestern Medical Center
Larry Michael Randal 1998 Kossiakoff Senior Scientist, Sunesis Pharmaceuticals
Richard Wagner 1998 Robert Fletterick DaVinci Healthcare Partners LLC
Javier Farinas 1997 Alan Verkman Founder and CTO, Caerus Molecular Diagnostics, Inc.
David Miller 1997 Ken Dill Simulations Plus, Lancaster, CA
Stephen Rader 1997 David Agard Professor, University of Northern British Columbia
Chris Schafmeister 1997 Robert Stroud Associate Professor, Temple University
Laleh Shayesteh 1997 Joe Gray Senior Licensing Officer, UC Berkeley
Kevin Silverstein 1997 Ken Dill Informatics Analyst, Minnesota Supercomuting Institute, University of Minnesota
Julie Sohl 1997 David Agard Teacher, Academy of Science, Virginia
Jonathan Davis 1996 David Agard Principal Scientist (Protein Design), Adnexus, Bristol-Myers Squibb R &D CO/Assoc. Adjunct Prof., Northeastern University
Thomas DeFay 1996 Fred Cohen Portfolio Director, CNSP Psychiatry AstraZeneca
Jennifer Fung 1996 John Sedat Associate Professor, UCSF, Ob/Gyn
Nalin Gupta 1996 Dennis Deen Professor Neurological Surgery, UCSF
Karen Han 1996 David Agard MD, Ph.D. Palo Alto Medical Foundation
Robert Rose 1996 Robert Stroud Ass. Prof., North Carolina State University
Karen Tang 1996 Ken Dill Bioinformaticist, Department of Genetics, Cell Biology & Development, University of Minnesota
Robert Cerpa 1995 Irwin (Tack) Kuntz Senior Patent Agent, Morrison & Foerster
Wendy Cornell 1995 Peter Kollman Global Strategy Lead, Drug Discovery, IBM Research
Theresa Gamble 1995 Clinical Research Fellow, Cato Research
Maria Longuemare 1995 Peter Kollman Clinical Instructor, Dept. of Psychiatry, UCSF
Paul Thomas 1995 Ken Dill SRI International
John Phillips 1994 Bill Morgan Sr. Scientific Director, Program Mgmt., Allen Institute for Brain Science
Yaxiong Sun 1994 Peter Kollman Director, Computation Chemistry, Amgen
Jason Swedlow 1994 David Agard Professor of Quantitative Cell Biology and President and CEO, University of Dundee and Glencoe Software, Inc.
Kingman Yee 1994 David Morgan Vice President, Product Development, Iridex
Joseph Paul Day 1993 Cherrie Boyer Staff Research Associate, UC Merced
Celia Schiffer 1992 Robert Stroud Professor Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, http://www.umassmed.edu/schifferlab/index.aspx
Glenn Gobbel 1991 John Fike Research Assistant Professor, Vanderbilt University Division of General Internal Medicine and Public Health, and Tennessee Valley Health System, Department of Veterans Affairs
Daniel Pilch 1991 Richard Shafer Associate Professor of Pharmacology, UMD New Jersey
Charles Wilson 1991 David Agard Vice President and Global Head of Stategic alliances, Novartis
James Hurley 1990 Robert Stroud Professor and Judy C. Webb Chair, UC Berkeley, Biochemistry, Biophysics and Structural Biology